PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100168890001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family Dof
Protein Properties Length: 430aa    MW: 47219.8 Da    PI: 4.9237
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100168890001genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof37.93.7e-121682152662
                        zf-Dof  26 lsqPryfCkaCrryWtkGGa...........lrnvPvGggrrknkkss 62 
                                   ++qPr+fCk+C+ryWt+G                vPvG+grrknk+s 
  Ote100168890001|100168890001 168 VNQPRHFCKNCQRYWTAGXXxxxxxxxxxxxXXXVPVGAGRRKNKNSA 215
                                   89****************7522222222211457***********976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-7168212IPR003851Zinc finger, Dof-type
PfamPF027012.1E-6168213IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MSEVKDPRIK LFGKTIELPE TELAAAAEKA AEASQSCEAG GEESSIQDPP SSSDSMLEES  60
NWNGDADDRE SNKSQSCPEQ DDKDEGRAQP PTSEELKDSN TTILVVKEPK ALPANSDAEP  120
MQSSKTEEDQ TESNNSQEKI LKKPDKIIPX XXXXXXXXXX XXXXXXXVNQ PRHFCKNCQR  180
YWTAGXXXXX XXXXXXXXXX XVPVGAGRRK NKNSASQFRG VPDGLQNAPN GIHRPVLVQH  240
TLKNGFHEDD HSSRSSTTAA SSNDEVGKTG LPETIPNCHP FPPQMPCFPG APWPYPWHSV  300
QWTAPISSPN FALPFYSTPP PFWGCAVPGP WNPVSLDEEC DNENNPAKCL WVPKTLRIDD  360
PGEAAKSSIW ATLGIKNERI DDRGGLFKAF QSQSKGNKKA QTQAPAPESS TVLQANPAAL  420
SRSLSFHESS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00046PBMTransfer from AT5G39660Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011085751.11e-156PREDICTED: cyclic dof factor 2-like
TrEMBLA0A068U1T11e-109A0A068U1T1_COFCA; Uncharacterized protein
STRINGVIT_14s0108g00980.t011e-107(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53224122